Rice Transporter Database
Phylogenomics analysis of Rice Transporter families
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GENERAL INFO
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Transporter Families
AAA
AAAP
ABC
AE
AEC
APC
Amt
Annexin
ArAE
ArsAB
ArsB
BASS
CCC
CDF
CEPT
CPA1
CPA2
CaCA
ClC
Ctr
DAAS
DMT
ENT
F-ATPase
FBT
FP
GIC
GPH
GUP
H+-PPase
HAAAP
IISP
KUP
LCT
MC
MEX
MFS
MIP
MIT
MOP
MPT
MscS
NCS1
NCS2
NSCC2
NhaD
NiCoT
Nramp
OPT
Oxa1
P-ATPase
POT
PPI
PiT
RND
SSS
SulP
TDT
Tat
Tic110
Trk
VIC
ZIP
Sequence information
RGAP V7 Locus
Family
Domain position
Chromosome
5' end
3' end
Alternative spliced products
RGAP V7 Annotation
RAP-DB Locus
NCBI Blast
Literature information
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Orthologs in Plants
Arabidopsis thaliana
Brachypodium distachyon
Zea mays
Cucumis sativus
Medicago truncatula
Mimulus guttatus
Populus trichocarpa
Ricinus communis
Vitis vinifera
Sorghum bicolor
Glycine max
Solanum lycopersicum
Triticum aestivum
Setaria italica
Hordeum vulgare
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Topology
Transmembrane Domain (TM)
N-terminal Signal Peptide (SignalP)
Chloroplast Transit Peptide (ChloroP)
Predicted Subcellular Localization
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Mutants
DJ-Ds
INDICA-Ds
AFFJP
CIRAD
CSIRO
GSNU
OSTID
PFG_FSTs
RIFGP
RMD
SHIP
TRIM
UCD
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Microarray
Affymetrix:
Anatomy
Anatomy_Simplified
Abiotic
Biotic
Agilent:
Anatomy
Hormone
Scale bar for single channel array:
7,13 Scale bar for two channel array:
-1,0,1
-2,0,2
-3,0,3
RNASeq
RNASEq:
Anatomy
Abiotic
Display Values
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