RTFDB
Rice Transcription Factor Phylogenomics Database
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GENERAL INFO
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Transcription factor families
AB13/VPI
Alfin-like
AP2-EREBP
ARF
ARR-B
BBR/BPC
BES1
bHLH
BSD
bZIP
C2C2-CO-like
C2C2-Dof
C2C2-GATA
C2C2-YABBY
C2H2
C3H
CAMTA
CCAAT
CPP
CSD
DBP
E2F-DP
EIL
FAR1
FHA
G2-like
GeBP
GRAS
GRF
HB
HRT
HSF
LFY
LIM
LOB
MADS
mTERF
MYB
MYB-related
NAC
OFP
Orphans
PBF-2-like
PLATZ
RWP-RK
S1Fa-like
SBP
Sigma70-like
SRS
TAZ
TCP
Tify
Trihelix
TUB
ULT
VOZ
WRKY
zf-HD
Transcriptional Regulators
ARID
AUX/IAA
Coactivator p15
DDT
GNAT
HMG
IWS1
Jumonji
LUG
MBF1
MED6
MED7
PHD
Pseudo ARR-B
RB
Rcd1-like
SET
SNF2
SOH1
SWI/SNF-BAF60b
SWI/SNF-SWI3
TRAF
Sequence information
RGAP V7 Locus
Family
Domain position
Chromosome
5' end
3' end
Alternative spliced products
RGAP V7 Annotation
RAP-DB Locus
NCBI Blast
Literature information
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Orthologs in Plants
Arabidopsis thaliana
Brachypodium distachyon
Zea mays
Cucumis sativus
Medicago truncatula
Mimulus guttatus
Populus trichocarpa
Ricinus communis
Vitis vinifera
Sorghum bicolor
Glycine max
Solanum lycopersicum
Triticum aestivum
Setaria italica
Hordeum vulgare
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Topology
Transmembrane Domain (TM)
N-terminal Signal Peptide (SignalP)
Chloroplast Transit Peptide (ChloroP)
Predicted Subcellular Localization
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Mutants
DJ-Ds
INDICA-Ds
AFFJP
CIRAD
GSNU
GSNU
OSTID
PFG_FSTs
RIFGP
RMD
SHIP
TRIM
UCD
UCD_FN
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Microarray
Affymetrix:
Anatomy
Anatomy_Simplified
Abiotic
Biotic
Agilent:
Anatomy
Hormone
Scale bar for single channel array:
7,13 Scale bar for two channel array:
-1,0,1
-2,0,2
-3,0,3
RNASeq
RNASEq:
Anatomy
Abiotic
Display Values
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